System Down.
Our servers are currently NOT processing any submissions, and we don't have an
estimate for recovery at present.
We strongly recommend using instead the
UIBK Sever of MiGA Online as
a complete, up-to-date replacement of this server.
Alternatively, you can also use
MiGA @ XSEDE.
Getting Started with MiGA
Welcome to the Microbial Genomes Atlas Online
TypeMat
Query the collection of type material genomes to identify the closest genomes available from formally named species and determine taxonomic classification and novelty rank
NCBI Prok
Query the complete- and chromosome-level NCBI Genome database (Prokaryotes) with your own genomes to identify the most closely related complete genomes available
Preproc
Submit your data to this project if you want to preprocess your genomic or metagenomic dataset without additional fine-resolution taxonomic analyses
Upload genome or metagenomeClades
If you want high resolution within well characterized species, query select clade-specific databases for typing using Average Nucleotide Identity (ANI)
List clade projectsEnvironments
We're currently expanding MiGA to include collections of genomes for environmental genomics. If you would like to see an additional set included, please contact us
WB Bins HQ
Population genomes (MAGs) recovered from the lakes and estuaries along the Chattahoochee River (Southeast USA) by Rodriguez-R et al 2020
GROS
Genome Repository of Oiled Systems: Curated collection of MAGs, SAGs, and isolates from crude-oil impacted environments by Karthikeyan et al 2020
TARA MAGs (Delmont)
Metagenome-assembled genomes (MAGs) recovered from the TARA Oceans metagenomic samples by Delmont et al 2018
TARA MAGs (Tully)
Metagenome-assembled genomes (MAGs) recovered from the TARA Oceans metagenomic samples by Tully et al 2018
RefSoil genomes
Manually-curated list of complete genomes from NCBI RefSeq associated with soil environments by Choi et al 2017
Bio-Gas Microbiome
MAGs from 134 samples collected from biogas plants and lab-scale reactors in seven countries by Campanaro et al 2020
MAGs
Metagenome-assembled genomes (MAGs) recovered from different binning projects
